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Bacteroides spp.
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Bacteroides spp.

Bacteroides spp. represent a diverse group of anaerobic bacteria that inhabit the human gastrointestinal tract, playing a crucial role in maintaining gut homeostasis and overall health. 

Beyond their contribution to normal physiological functions, emerging research has identified Bacteroides spp. as potential biomarkers with implications for disease diagnosis, treatment, and even pregnancy outcomes. 

Bacteroides spp., Members of the Bacteroidetes Phylum  [2., 13.] 

Bacteroidetes, a phylum of gram-negative bacteria, constitutes a significant portion of the human gut microbiota and is integral to maintaining gut homeostasis. 

Bacteroidetes make up about 30% of the human gut microbiota, with this proportion varying based on factors like population, geography, age, and diet.  This phylum includes several genera, notably Bacteroides, which are gram-negative, non-spore forming, anaerobic, rod-shaped bacteria. 

About 24 species of Bacteroides have been identified, with B. fragilis and B. thetaiotaomicron being the most studied.

Taxonomically, Bacteroidetes are classified into several families and genera, including Bacteroides, Prevotella, and Porphyromonas

Microbiological Background of Bacteroides spp.  [7., 20., 22.] 

Bacteroides spp. comprise a diverse group of Gram-negative anaerobic bacteria that are predominant members of the human gut microbiota. 

These bacteria play a crucial role in maintaining intestinal homeostasis, contributing to host metabolism, immune regulation, and defense against pathogens.

Overview of Bacteroides spp. Taxonomy and Characteristics  [19., 23.]

The genus Bacteroides encompasses a wide array of species, including Bacteroides fragilis, Bacteroides vulgatus, Bacteroides thetaiotaomicron, and many others.  These bacteria are characterized by their ability to thrive in anaerobic conditions, utilizing complex polysaccharides as a source of energy through fermentation. 

Bacteroides spp. possess unique genetic and metabolic features that enable them to efficiently degrade dietary fibers and carbohydrates, contributing to the production of short-chain fatty acids and other metabolites that impact host physiology.

Role of Bacteroides spp. in the Human Microbiome  [17., 20., 24.] 

Bacteroides spp. are key members of the human gut microbiome, comprising a significant proportion of the microbial community in the colon. 

Their presence and abundance are influenced by various factors including diet, host genetics, and environmental exposures.  Within the gut ecosystem, Bacteroides spp. interact with other commensal bacteria and host cells, participating in complex microbial networks that regulate immune responses, nutrient metabolism, and intestinal barrier function. 

In adults, Firmicutes and Bacteroidetes produce short-chain fatty acids (SCFAs) such as acetate, propionate, and butyrate, which are derived primarily from the fermentation of undigested dietary polysaccharides. 

SCFAs play significant roles in gut health, glucose homeostasis, and lipid metabolism. Bacteroidetes, particularly the genera Bacteroides and Prevotella, are major contributors to SCFA production, especially propionate. 

They adapt flexibly to the nutritional environment of the gut, using a wide range of dietary polysaccharides and proteins. 

The metabolic activity of Bacteroides can be influenced by the type of carbohydrates and nitrogen sources available, impacting the production of SCFAs and other organic acids. 

Modulating Bacteroides metabolism through dietary interventions holds potential for restoring gut microbiota balance and promoting metabolic health. 

Imbalances in the composition of the gut microbiota, including alterations in Bacteroides spp. abundance, have been associated with numerous disease states, highlighting the importance of understanding their role in health and disease.

Clinical and Health Implications of Bacteroides

Bacteroides play a crucial role in human health and have significant clinical implications related to their presence and abundance in the microbiome. 

Maintaining a balanced ratio of Bacteroides to other phyla like Firmicutes is essential for gut health, biodiversity, and homeostasis of metabolism, immune function, and colonization resistance.  [2.]  

Bacteroidetes species like Bacteroides fragilis and B. thetaiotaomicron play beneficial roles as commensals, fermenting polysaccharides to produce short-chain fatty acids that serve as an energy source for the host. They also contribute to bile acid metabolism and provide colonization resistance against pathogens like Clostridioides difficile.  

Reduced abundance of Bacteroidetes has been associated with obesity, though the evidence is not conclusive.  However, alterations in the Firmicutes/Bacteroidetes ratio and their metabolic capabilities may influence energy extraction from food and weight gain.  [10.]

Modulating Bacteroides levels through approaches like fecal microbiota transplantation (FMT) and microbiota modulation are being explored as therapeutic strategies for conditions like C. difficile infection, diabetes, and IBD.  [6.]

The increasing scientific understanding of the health and clinical implications of Bacteroidetes abundance has emerged as an important biomarker for assessing gut health, metabolic status, and disease risk. 

Specific Role of Bacteroides as a Biomarker

Bacteroides abundance has been associated with various health outcomes and disease states, making it a promising biomarker in medical diagnostics. 

Bacteroides abundance reflects the composition and function of the gut microbiota, offering insights into the dynamic interplay between microbial communities and host physiology.

Studies have demonstrated correlations between Bacteroides levels and metabolic health parameters including obesity, insulin resistance, and dyslipidemia.  [11., 16.]

Additionally, alterations in Bacteroides abundance have been linked to gastrointestinal disorders such as inflammatory bowel disease (IBD), irritable bowel syndrome (IBS), and colorectal cancer, suggesting its utility as a diagnostic marker for gut dysbiosis and gastrointestinal health.  [12., 15.]

Implications of High and Low Bacteroides Abundance

Both high and low Bacteroides abundance have clinical implications for human health.  High Bacteroides abundance is generally associated with a healthy gut microbiome and favorable metabolic outcomes, while low Bacteroides abundance may indicate dysbiosis, inflammation, and increased disease risk.  [8., 12., 15.] 

Understanding the implications of Bacteroides abundance as a biomarker can aid in early disease detection, risk stratification, and personalized treatment strategies tailored to individual patients' gut microbiota composition.

Laboratory Testing for Bacteroides Levels

Test Type, Sample Collection and Preparation

Bacteroides levels are assessed in stool samples.  Stool samples may be collected from the comfort of home.  

Testing may require avoidance of certain medications and/or supplements including probiotics prior to sample collection.  It is important to consult with the ordering provider for full test preparation instructions.  

Interpretation of Test Results

Optimal Levels of Bacteroides

It is important to consult with the laboratory company used for test interpretation.  Bacteroides levels are typically assessed by species.  

One lab company provides the following reference range for Bacteroides fragilis levels: 1.6e9 - 2.5e11org/g [18.]

Clinical Implications of High Bacteroides 

High levels of Bacteroides in the gut microbiome are generally associated with a healthy state and favorable metabolic outcomes. 

A high relative abundance of Bacteroides compared to other phyla like Firmicutes is considered essential for maintaining gut health, biodiversity, and homeostasis of metabolism, immune function, and colonization resistance.  

Bacteroidetes are considered a "keystone taxon" in the gut microbiome, and their depletion can lead to detrimental shifts in the microbial community structure.  [12., 22.]

Several studies have found an association between high Bacteroidetes levels and a lean phenotype or healthy weight.  A higher Bacteroidetes/Firmicutes ratio was associated with a lower body mass index (BMI).  [8., 11.] 

Conversely, a lower abundance of Bacteroidetes has been observed in obese individuals compared to lean individuals.  [8.] 

High levels of Bacteroidetes species like Bacteroides fragilis and B. thetaiotaomicron are considered beneficial as commensals, fermenting polysaccharides to produce short-chain fatty acids that serve as an energy source for the host. They also contribute to bile acid metabolism and provide colonization resistance against pathogens like Clostridioides difficile.  [22.]

Low Bacteroidetes Abundance  [2., 11., 18.] 

Lower levels of Bacteroides have been associated with inflammatory bowel diseases (IBD) like ulcerative colitis, where specific Bacteroides species exhibit significantly lower abundance compared to healthy controls.

The loss of these species is suggested to result from disease exacerbation and may serve as potential biomarkers for disease activity.

Low Bacteroides levels may disrupt microbial community dynamics, favoring the overgrowth of potentially harmful bacteria and diminishing the beneficial effects of Bacteroides-mediated functions, such as the fermentation of dietary fibers and production of short-chain fatty acids (SCFAs).  [3.] 

Therefore, maintaining a high abundance of Bacteroides in the gut microbiome is generally considered a favorable state, associated with better metabolic health, a lean phenotype, and a lower risk of inflammatory conditions like IBD. 

Monitoring Bacteroides levels may have clinical significance in assessing gut health, disease risk, and potential therapeutic interventions aimed at restoring a balanced microbiome.

Bacteroides spp. Treatment Considerations

Antibiotic Therapy and Bacteroides spp.  [14.] 

Antibiotics are commonly used to treat bacterial infections, including those caused by Bacteroides spp.  However, indiscriminate antibiotic use can disrupt the balance of the gut microbiota, leading to dysbiosis and potentially promoting the overgrowth of antibiotic-resistant strains of Bacteroides spp. 

Clinicians must weigh the benefits of antibiotic therapy against the risks of unintended consequences, such as the development of antibiotic-associated diarrhea or the emergence of multidrug-resistant bacteria.

Probiotics and Prebiotics in Modulating Bacteroides spp.  [16.] 

Probiotics and prebiotics offer alternative strategies for modulating the gut microbiota, including Bacteroides spp., to promote health and prevent disease. 

Probiotics are live microorganisms that confer health benefits when administered in adequate amounts, while prebiotics are non-digestible food components that selectively stimulate the growth and activity of beneficial bacteria in the gut. 

Studies have shown that certain probiotic strains such as Lactobacillus and Bifidobacterium can influence the abundance and composition of Bacteroides spp. in the gut, contributing to improvements in gut barrier function and immune regulation.

Dietary Interventions and Bacteroides spp.  [16.] 

Dietary interventions play a crucial role in shaping the gut microbiota, including Bacteroides spp. Certain dietary components, such as fiber and polyphenols, serve as substrates for fermentation by gut bacteria, including Bacteroides spp., leading to the production of short-chain fatty acids and other metabolites with beneficial effects on host health. 

Conversely, diets high in processed foods and saturated fats have been associated with dysbiosis and increased abundance of potentially pathogenic bacteria, including some strains of Bacteroides spp. 

Thus, dietary modifications represent a non-pharmacological approach to modulating Bacteroides spp. and promoting gut health.

How Does Bacteroides spp. Affect Pregnancy?

Maternal Gut Microbiota Composition During Pregnancy  [4., 5.]

Pregnancy induces significant changes in the maternal gut microbiota composition, with shifts in microbial diversity and abundance observed across trimesters. 

Bacteroides spp., along with other commensal bacteria, undergo dynamic changes in response to hormonal fluctuations, immune modulation, and dietary factors during pregnancy. 

Understanding these alterations in the maternal gut microbiota is critical for elucidating their effects on maternal health and pregnancy outcomes.

Role of Bacteroides spp. in Maternal Health During Pregnancy  [24.] 

Bacteroides spp. play a multifaceted role in maternal health during pregnancy, influencing various physiological processes essential for maternal well-being. 

These bacteria contribute to nutrient metabolism, immune regulation, and gut barrier function, all of which are crucial for supporting a healthy pregnancy.  

Dysbiosis characterized by alterations in Bacteroides spp. abundance or diversity has been associated with pregnancy complications such as gestational diabetes, preterm birth, and preeclampsia, highlighting the importance of maintaining microbial balance during pregnancy.

Implications for Neonatal Gut Colonization and Development  [24.] 

The maternal gut microbiota serves as a source of microbial colonization for the neonate during birth and early infancy. 

Bacteroides spp. transmitted from the mother to the infant play a vital role in establishing the neonatal gut microbiota and shaping immune development.  

Perturbations in maternal Bacteroides spp. colonization, such as antibiotic exposure or maternal dysbiosis, may have long-lasting effects on neonatal gut health and immune function, increasing the risk of allergic and autoimmune diseases later in life.

Therapeutic Interventions Targeting Bacteroides spp. During Pregnancy  [9., 24.]

Given the potential impact of Bacteroides spp. on pregnancy outcomes, therapeutic interventions aimed at modulating maternal gut microbiota composition have garnered interest as potential strategies for improving maternal and neonatal health. 

Probiotic supplementation with Bacteroides spp.-containing formulations, dietary modifications, and antibiotic stewardship are among the approaches being investigated to promote a healthy gut microbiota during pregnancy and mitigate adverse pregnancy outcomes associated with dysbiosis.

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See References

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[12.] Nomura K, Ishikawa D, Okahara K, Ito S, Haga K, Takahashi M, Arakawa A, Shibuya T, Osada T, Kuwahara-Arai K, Kirikae T, Nagahara A. Bacteroidetes Species Are Correlated with Disease Activity in Ulcerative Colitis. J Clin Med. 2021 Apr 17;10(8):1749. doi: 10.3390/jcm10081749. PMID: 33920646; PMCID: PMC8073534.

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[23.] Wu GD, Chen J, Hoffmann C, Bittinger K, Chen YY, Keilbaugh SA, Bewtra M, Knights D, Walters WA, Knight R, Sinha R, Gilroy E, Gupta K, Baldassano R, Nessel L, Li H, Bushman FD, Lewis JD. Linking long-term dietary patterns with gut microbial enterotypes. Science. 2011 Oct 7;334(6052):105-8. doi: 10.1126/science.1208344. Epub 2011 Sep 1. PMID: 21885731; PMCID: PMC3368382.

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